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fasta files for the mitochondrial b. lanceolatum genome and transcriptome sequences  (Biotechnology Information)

 
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    Biotechnology Information fasta files for the mitochondrial b. lanceolatum genome and transcriptome sequences
    Fasta Files For The Mitochondrial B. Lanceolatum Genome And Transcriptome Sequences, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genome+sequence+files+%28%2Efasta%29/pm39854450-353-12-20?v=Biotechnology+Information
    Average 90 stars, based on 1 article reviews
    fasta files for the mitochondrial b. lanceolatum genome and transcriptome sequences - by Bioz Stars, 2026-07
    90/100 stars

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    Overview of the trieFinder workflow. In step 1, each of the selected sequence databases, RefSeq, UniGene, and genome in this case, is scanned and all potential DGE tags in each database are identified. In the second step, these potential tags are merged into a single database of tags, db_tags. In step 3, the experimentally-determined tags are mapped to the db_tags database using a prefix tree. The net result is an annotation of each experimentally-determined tag with respect to the RefSeq, UniGene, and/or genome databases.

    Journal: BMC Bioinformatics

    Article Title: trieFinder: an efficient program for annotating Digital Gene Expression (DGE) tags

    doi: 10.1186/1471-2105-15-329

    Figure Lengend Snippet: Overview of the trieFinder workflow. In step 1, each of the selected sequence databases, RefSeq, UniGene, and genome in this case, is scanned and all potential DGE tags in each database are identified. In the second step, these potential tags are merged into a single database of tags, db_tags. In step 3, the experimentally-determined tags are mapped to the db_tags database using a prefix tree. The net result is an annotation of each experimentally-determined tag with respect to the RefSeq, UniGene, and/or genome databases.

    Article Snippet: First, it scans FASTA files of RefSeq, UniGene, and genomic DNA sequences to create a database of all tags that can be derived from a predefined restriction site.

    Techniques: Sequencing